{"repo":"seung-lab/cloud-volume","free":true,"listed":false,"github":"https://github.com/seung-lab/cloud-volume","clone":"git clone https://github.com/seung-lab/cloud-volume.git","description":"Read and write Neuroglancer datasets programmatically.","language":"Python","stars":175,"topics":["neuroglancer","volumetric-data","python","cloud","numpy","connectomics","microscopy","microscopy-images","chunked-image","biomedical-image-processing"],"license":"BSD-3-Clause","category":"deployment-docker-iac","readme_excerpt":"CloudVolume: IO for Neuroglancer Datasets CloudVolume is a serverless Python client for random access reading and writing of Neuroglancer volumes in \"Precomputed\" format, a set of representations for arbitrarily large volumetric images, meshes, and skeletons. CloudVolume is typically paired with Igneous, a Kubernetes compatible system for generating image hierarchies, meshes, skeletons, and other dependency free jobs that can be applied to petavoxel scale images. Precomputed volumes are typically stored on AWS S3, Google Storage, or locally. CloudVolume can read and write to these object storage providers given a service account token with appropriate permissions. However, these volumes can be stored on any service, including an ordinary webserver or local filesystem, that supports key-value access. The combination of Neuroglancer, Igneous, and CloudVolume comprises a system for visualizing, processing, and sharing (via browser viewable URLs) petascale datasets within and between laboratories. A typical example usage would be to visualize raw electron microscope scans of mouse, fish, or fly brains up to a cubic millimeter in physical dimension. Neuroglancer and Igneous would enable you to visualize each step of the process of montaging the image, fine tuning alignment vector fields, creating segmentation layers, ROI masks, or performing other types of analysis. CloudVolume enables you to read from and write to each of these layers. Recently, we have introduced the ability to ","default_branch":null,"files":null,"tree":[],"storefront":"/r/seung-lab","claimed":false,"request_supported":{"post":"https://gitbuyer.com/r/seung-lab/cloud-volume/request-supported","requests":0},"note":"indexed from public GitHub; nothing is for sale on this page. Clone it from GitHub. Paid listings live at /search."}