{"repo":"nf-core/tools","free":true,"listed":false,"github":"https://github.com/nf-core/tools","clone":"git clone https://github.com/nf-core/tools.git","description":"Python package with helper tools for the nf-core community.","language":"Python","stars":319,"topics":["nextflow","pipeline","workflow","bioinformatics","python","linter","linting","nf-core"],"license":"MIT","category":"workflow-automation","readme_excerpt":"A python package with helper tools for the nf-core community. The nf-core tools package is written in Python and can be imported and used within other packages. For documentation of the internal Python functions, please refer to the nf-core tools Python API docs. Installation For full installation instructions, please see the nf-core documentation. Below is a quick-start for those who know what they're doing: Bioconda Install from Bioconda: Alternatively, you can create a new environment with both nf-core/tools and nextflow: Python Package Index Install from PyPI: Development version If editing, fork and clone the repo, then install as follows: Contributions and Support If you would like to contribute to this package, please see the contributing guidelines. For further information or help, don't hesitate to get in touch on the Slack #tools channel (you can join with this invite). Citation If you use nf-core tools in your work, please cite the nf-core publication as follows: The nf-core framework for community-curated bioinformatics pipelines. Philip Ewels, Alexander Peltzer, Sven Fillinger, Harshil Patel, Johannes Alneberg, Andreas Wilm, Maxime Ulysse Garcia, Paolo Di Tommaso & Sven Nahnsen. Nat Biotechnol. 2020 Feb 13. doi: 10.1038/s41587-020-0439-x.","default_branch":null,"files":null,"tree":[],"storefront":"/r/nf-core","claimed":false,"request_supported":{"post":"https://gitbuyer.com/r/nf-core/tools/request-supported","requests":0},"note":"indexed from public GitHub; nothing is for sale on this page. Clone it from GitHub. Paid listings live at /search."}