{"repo":"jamesjcai/scGEAToolbox","free":true,"listed":false,"github":"https://github.com/jamesjcai/scGEAToolbox","clone":"git clone https://github.com/jamesjcai/scGEAToolbox.git","description":"scGEAToolbox: Matlab toolbox for single-cell gene expression analyses","language":"MATLAB","stars":30,"topics":["scrna-seq","workflow","demo-scripts","analyses","dimensionality","trajectory","matlab-toolbox","rna-seq-analysis","tsne","phate"],"license":"MIT","category":"workflow-automation","readme_excerpt":"scGEAToolbox - a Matlab toolbox for single-cell RNA-seq data analyses --------------------------------------------------------------------- Installation Guide There are three ways to install scGEAToolbox : :: Method 1: Install as a MATLAB Add-On (Recommended) 1. Open the Add-On Explorer - In MATLAB, go to the Home tab. - Click on the Add-Ons icon to open the Add-On Explorer. 2. Search for scGEAToolbox - In the search bar, type \"scGEAToolbox\" and press Enter. 3. Select and Install - Find \"scGEAToolbox (single-cell Gene Expression Analysis Toolbox)\" in the results. - Click the Add button to install the toolbox. 5. Launch scGEAToolbox - To start using scGEAToolbox, enter: - This will open the graphical user interface for single-cell transcriptomic data analysis. :: Method 2: Install via MATLAB Add-On ( .mltbx ) 1. Download scGEAToolbox.mltbx from: - 🔗 GitHub Releases - 🔗 MATLAB File Exchange 2. Install the toolbox: - Double-click scGEAToolbox.mltbx - MATLAB will open the Add-On Manager - Click Install 3. Verify the installation by running: :: Method 3: Install via GitHub (For Developers) 1. Run the following code in MATLAB: 2. Add the toolbox to the MATLAB path Getting Started Quickly Using the SCGEATOOL App Run the following code in MATLAB to start Read Documentation scGEAToolbox Documentation ( readthedocs ) SEE ALSO - Standalone Application SCGEATOOL.exe is a standalone application running on Windows machines that do not have MATLAB installed. SCGEATOOL is a lightweight and","default_branch":null,"files":null,"tree":[],"storefront":"/r/jamesjcai","claimed":false,"request_supported":{"post":"https://gitbuyer.com/r/jamesjcai/scGEAToolbox/request-supported","requests":0},"note":"indexed from public GitHub; nothing is for sale on this page. Clone it from GitHub. Paid listings live at /search."}