{"repo":"fairgenomes/fairgenomes-semantic-model","free":true,"listed":false,"github":"https://github.com/fairgenomes/fairgenomes-semantic-model","clone":"git clone https://github.com/fairgenomes/fairgenomes-semantic-model.git","description":"FAIR Genomes semantic metadata model. The core is a YAML file, which is transformed into all other desired output formats.","language":"HTML","stars":13,"topics":["fair-genomes","emx","yaml","molgenis","art-decor","rdf","owl","markdown","transformation"],"license":null,"category":"databases-storage","readme_excerpt":"FAIR Genomes semantic schema Explore Discover the full schema at the interactive overview. Source The source of the schema is located at fair-genomes.yml. The reference lookup lists are available at lookups. Outputs Representations of the schema for specific systems/users are generated from the schema. The following outputs are available: Electronic Data Capture (EDC) systems - MOLGENIS EMX1 database setup at molgenis-emx. - PALGA Codebook at palga-codebook. - ART-DECOR at art-decor. The ART-DECOR XML is uploaded to NICTIZ made available for iCRF Generator. FAIR Genomes interoperable case report forms can be created by iCRF Generator in these EDC formats: - Castor - Step - Castor - Report - Castor - Survey - REDCap - OpenClinica 3 Resource Description Framework (RDF) - Application ontology at ontology. - Resources for new terms at resource. Documentation - Interactive overview at markdown. View it here. - Typesetted LaTeX/PDF at latex and pdf. View it here. - LODE page at lode. View it here. Demo Please try the public demo at give us feedback. Other links - Persistent namespace is provided by W3ID, linking to ontology and resources. - Find us on FAIRSharing. - Available on BioPortal. Technical notes Using an international list of institutes The Research Organization Registry (https://ror.org/) provides a unique identifier for every research organization in the world. The 2021-09-23 ROR Data release (see https://zenodo.org/communities/ror-data) has been transformed in a FAIR G","default_branch":null,"files":null,"tree":[],"storefront":"/r/fairgenomes","claimed":false,"request_supported":{"post":"https://gitbuyer.com/r/fairgenomes/fairgenomes-semantic-model/request-supported","requests":0},"note":"indexed from public GitHub; nothing is for sale on this page. Clone it from GitHub. Paid listings live at /search."}