{"repo":"epigen/MrBiomics","free":true,"listed":false,"github":"https://github.com/epigen/MrBiomics","clone":"git clone https://github.com/epigen/MrBiomics.git","description":"MrBiomics: Composable modules and recipes automate bioinformatics for multi-omics analyses","language":"R","stars":175,"topics":["automation","bioinformatics","biomedical","data-science","framework","snakemake","workflows","epigenetics","genetics","genomics"],"license":"MIT","category":"workflow-automation","readme_excerpt":"🚀🧬 MrBiomics: Composable m odules and r ecipes automate bi oinformatics for multi- omics analyses \"For many outcomes, roughly 80% of consequences come from 20% of causes (the \"vital few\").\" - The Pareto Principle by Vilfredo Pareto Get 80% of all standard (biomedical) data science analyses done semi-automated with 20% of the effort, by leveraging Snakemake's module functionality to use and combine pre-existing workflows into arbitrarily complex analyses. [!IMPORTANT] If you use MrBiomics , please don't forget to give credit to the authors by citing this original repository and the respective Modules and Recipes . ⚡ Quickstart: 5 Commands to Your First Results! Stop wrestling with complicated setups and start discovering new biology! Get MrBiomics up and running from scratch (assuming conda is installed) with exactly 5 commands : 🎉 Boom! You're analyzing data! This simple snippet creates your Snakemake environment, fetches MrBiomics , and executes the built-in quickstart analysis. [!TIP] ⏳ Grab a coffee! It takes around 10 minutes to run the first time as it automatically installs all the required software for you. Curious about the magic that just happened? Dive deeper and explore MrBiomics' capabilities starting with our Quickstart ! ⏳ TL;DR - More Time for Science! \"Programming is about trying to make the future less painful. It’s about making things easier for our teammates.\" from The Pragmatic Programmer by Andy Hunt & Dave Thomas - Why : Time is the most precious reso","default_branch":null,"files":null,"tree":[],"storefront":"/r/epigen","claimed":false,"request_supported":{"post":"https://gitbuyer.com/r/epigen/MrBiomics/request-supported","requests":0},"note":"indexed from public GitHub; nothing is for sale on this page. Clone it from GitHub. Paid listings live at /search."}