{"repo":"confusius-tools/confusius","free":true,"listed":false,"github":"https://github.com/confusius-tools/confusius","clone":"git clone https://github.com/confusius-tools/confusius.git","description":"Python package for analysis and visualization of functional ultrasound imaging data.","language":"Python","stars":20,"topics":["brain-connectivity","fusi","neuroimaging","data-analysis","data-visualization","neuroscience","python","ultrasound"],"license":"BSD-3-Clause","category":"analytics","readme_excerpt":"ConfUSIus [!NOTE] Beta Status — ConfUSIus is now in beta and under active development. Core functionality is in place, but APIs may still evolve between releases as we improve stability and user experience. We are happy to help you get started: join our weekly drop-in hours on Discord or open an issue on GitHub for questions and feature requests. ConfUSIus is a Python package and napari plugin for handling, visualization, preprocessing, and statistical analysis of functional ultrasound imaging (fUSI) data. Features [!NOTE] ConfUSIus is not designed as an out-of-the-box, end-to-end fUSI analysis pipeline. Because the fUSI field has not yet converged on standard processing workflows, ConfUSIus instead aims to provide the fundamental building blocks needed to implement any processing workflow described in the fUSI literature, or to design entirely new ones. Researchers can combine these blocks to build analysis pipelines suited to their experimental needs. - I/O Operations : Load and save fUSI data in various formats (AUTC, EchoFrame, Iconeus, NIfTI, Zarr), with automatic fUSI-BIDS sidecars for NIfTI. - Beamformed IQ Processing : Process raw beamformed IQ signals into power Doppler, velocity, and other derived metrics. - Quality Control : Compute quality metrics (DVARS, tSNR, CV) to assess data quality - Registration : Motion correction and spatial alignment tools. - Brain Atlas Integration : Map fUSI data to standard brain atlases for region-based analysis. - Signal Extraction ","default_branch":null,"files":null,"tree":[],"storefront":"/r/confusius-tools","claimed":false,"request_supported":{"post":"https://gitbuyer.com/r/confusius-tools/confusius/request-supported","requests":0},"note":"indexed from public GitHub; nothing is for sale on this page. Clone it from GitHub. Paid listings live at /search."}