{"repo":"cafferychen777/ggpicrust2","free":true,"listed":false,"github":"https://github.com/cafferychen777/ggpicrust2","clone":"git clone https://github.com/cafferychen777/ggpicrust2.git","description":"Make Picrust2 Output Analysis and Visualization Easier","language":"R","stars":200,"topics":["picrust2","functional-data","metagenomic-analysis","visualization","tax4fun2","16s-rrna","metagenomics","microbiome","microbiota","bioinformatics"],"license":null,"category":"analytics","readme_excerpt":"ggpicrust2 🌟 If you find ggpicrust2 helpful, please consider giving us a star on GitHub! Your support greatly motivates us to improve and maintain this project. 🌟 ggpicrust2 is a comprehensive package designed to provide a seamless and intuitive solution for analyzing and interpreting the results of PICRUSt2 functional prediction. It offers a wide range of features, including pathway name/description annotations, advanced differential abundance (DA) methods, and visualization of DA results. One of the newest additions to ggpicrust2 is the capability to compare the consistency and inconsistency across different DA methods applied to the same dataset. This feature allows users to assess the agreement and discrepancy between various methods when it comes to predicting and sequencing the metagenome of a particular sample. It provides valuable insights into the consistency of results obtained from different approaches and helps users evaluate the robustness of their findings. By leveraging this functionality, researchers, data scientists, and bioinformaticians can gain a deeper understanding of the underlying biological processes and mechanisms present in their PICRUSt2 output data. This comparison of different methods enables them to make informed decisions and draw reliable conclusions based on the consistency evaluation of macrogenomic predictions or sequencing results for the same sample. If you are interested in exploring and analyzing your PICRUSt2 output data, ggpicrust2 ","default_branch":null,"files":null,"tree":[],"storefront":"/r/cafferychen777","claimed":false,"request_supported":{"post":"https://gitbuyer.com/r/cafferychen777/ggpicrust2/request-supported","requests":0},"note":"indexed from public GitHub; nothing is for sale on this page. Clone it from GitHub. Paid listings live at /search."}