{"repo":"biothings/mygene.info","free":true,"listed":false,"github":"https://github.com/biothings/mygene.info","clone":"git clone https://github.com/biothings/mygene.info.git","description":"MyGene.info: A BioThings API for gene annotations","language":"Python","stars":133,"topics":["biothings","gene","gene-annotations","api","webservice","bioinformatics","ncats-translator"],"license":null,"category":"api-integrations-sdks","readme_excerpt":"MyGene.info Description MyGene.info is a web API for accessing gene annotation information (Gene Annotation Query as a Service). MyGene.info is part of BioThings API collection, together with MyVariant.info, MyChem.info and more. For more information see this reference: Xin J, Mark A, Afrasiabi C, Tsueng G, Juchler M, Gopal N, Stupp GS, Putman TE, Ainscough BJ, Griffith OL, Torkamani A, Whetzel PL, Mungall CJ, Mooney SD, Su AI, Wu C. High-performance web services for querying gene and variant annotation. Genome Biol. 2016 May 6;17(1):91. doi: 10.1186/s13059-016-0953-9. https://www.ncbi.nlm.nih.gov/pubmed/27154141 Setup Mygene.info Web Server Locally ## 1. Prerequisites python ( =3.4) git In Ubuntu/Debian system, you can install all prerequisites by sudo apt-get install python-dev python-setuptools git 2. Clone this repo: git clone https://github.com/biothings/mygene.info.git 3. Setup a Python \"virtualenv\" (optional, but highly recommended): sudo easy install pip sudo pip install virtualenv virtualenv /opt/devpy 4. Install required python modules: pip install -r ./requirements web.txt 5. Make your own \"config.py\" file cd src vim config.py from config web import from config hub import # And additional customizations 6. Run your dev server python index.py --debug or python index.py --debug --port=9000","default_branch":null,"files":null,"tree":[],"storefront":"/r/biothings","claimed":false,"request_supported":{"post":"https://gitbuyer.com/r/biothings/mygene.info/request-supported","requests":0},"note":"indexed from public GitHub; nothing is for sale on this page. Clone it from GitHub. Paid listings live at /search."}