{"repo":"OxfordDemSci/gwasdiversitymonitor","free":true,"listed":false,"github":"https://github.com/OxfordDemSci/gwasdiversitymonitor","clone":"git clone https://github.com/OxfordDemSci/gwasdiversitymonitor.git","description":"Source code for the GWAS Diversity Monitor","language":"CSS","stars":16,"topics":["genomics","dashboard","python","d3js","flask"],"license":null,"category":"dashboards-admin","readme_excerpt":"Introduction This is a repository to accompany the GWAS Diversity Monitor, currently maintained as part of the Leverhulme Centre for Demographic Science. The dashboard can be found at: gwasdiversitymonitor.com The frontend is written in D3 4.0 (a JavaScript library for visualizing data with HTML, SVG, and CSS) with the backend hosted in Flask (a lightweight WSGI web application framework written in Python). Grateful attributions regarding data are made to the EMBL-EBI GWAS Catalog . In summary, the dashboard visualizes a systematic interactive review of all GWAS published to date. This repo can be cloned and ran on-the-fly to generate a server on localhost as required. The dashboard and associated summary statistics check daily for updates from the Catalog and update with new releases. The cron adapts a couple of functions from our Scientometric Review of all GWAS Prerequisites As a pre-requisite to running this locally, you will need a working Python 3 installation with all of the necessary dependencies detailed in requirements.txt (generated by pipreqs). We strongly recommend virtual environments and Anaconda. Running the Code To run: clone this directory, cd into the directory, download the data with \"python generate data.py\", and serve the project by calling \"python gwasdiversitymonitor.py\". The launcher starts the Flask application behind Gunicorn, using production WSGI workers rather than Flask's development server. By default it binds to port 8000; set GWAS HOST , GWAS","default_branch":null,"files":null,"tree":[],"storefront":"/r/OxfordDemSci","claimed":false,"request_supported":{"post":"https://gitbuyer.com/r/OxfordDemSci/gwasdiversitymonitor/request-supported","requests":0},"note":"indexed from public GitHub; nothing is for sale on this page. Clone it from GitHub. Paid listings live at /search."}