{"repo":"Mike-Honey/covid-19-genomes","free":true,"listed":false,"github":"https://github.com/Mike-Honey/covid-19-genomes","clone":"git clone https://github.com/Mike-Honey/covid-19-genomes.git","description":"Projects on COVID-19 topic of genomic sequencing - mostly DataViz","language":"Python","stars":58,"topics":["covid-19","coronavirus","genomics","data-visualization","powerbi","global"],"license":"MIT","category":"analytics","readme_excerpt":"covid-19-genomes DataViz Projects on topic of COVID-19 genomic sequencing. Mostly showing Australia by default, other countries available for selection. Most pages now show the nextclade.org lineages, an alternative lineage classification tool. Alternates of most pages are also available showing the original GISAID lineages if preferred, but most experts recommend nextclade for quicker and more precise calls, especially of newer lineages. Pages with (nextclade) in the page title show nextclade lineages, otherwise GISAID lineages are show. The page navigation is at bottom-centre, e.g. . gisaid.org with nextclade lineages - top Lineages by Country/Location Link to interactive DataViz gisaid.org with nextclade lineages - top Countries for a selected Lineage Link to interactive DataViz gisaid.org with nextclade lineages - top Locations for a selected Lineage Link to interactive DataViz gisaid.org with nextclade lineages - Lineage growth comparison (log) Link to interactive DataViz gisaid.org with nextclade lineages - map Visualise the geographical spread of a selected lineage. Use the play control at bottom for an animated view of the spread. Locations are approximate - typically by reporting state/province or country. Bubble sizes are driven by the % of the total set of samples selected. Link to interactive DataViz gisaid.org with nextclade lineages - sankey Rolls up the evolutionary tree of lineages from the highest level ancestors (far left) to the most evolved descendants (fa","default_branch":null,"files":null,"tree":[],"storefront":"/r/Mike-Honey","claimed":false,"request_supported":{"post":"https://gitbuyer.com/r/Mike-Honey/covid-19-genomes/request-supported","requests":0},"note":"indexed from public GitHub; nothing is for sale on this page. Clone it from GitHub. Paid listings live at /search."}