{"repo":"CBIIT/Misteli-Lab-CCR-NCI","free":true,"listed":false,"github":"https://github.com/CBIIT/Misteli-Lab-CCR-NCI","clone":"git clone https://github.com/CBIIT/Misteli-Lab-CCR-NCI.git","description":"Collection of statistical scripts, image analysis workflows, data used in publications by the Misteli Lab.","language":"HTML","stars":17,"topics":["knime","r","cancer","biology","biological-data-analysis","image-analysis","genomic-data-analysis","workflow","misteli-lab","deep"],"license":null,"category":"workflow-automation","readme_excerpt":"Collection of KNIME workflows, statistical analysis scripts (.Rmd), (primary/secondary) data used in publications by Misteli Lab Updates: June 13, 2018 KNIME (version 3.2.1) Image Analysis Workflows, R markdown scripts, and secondary data for Jowhar et. al., 2018 . Sept 20, 2017 R scripts with (secondary) data and KNIME (version 3.2.1) workflows for Gudla et. al., CSH SQB, 2017 . Sept 07, 2017 R scripts with (secondary) data and KNIME (version 3.2.1) workflows for Jowhar et. al., Methods, 2018 . Description of folders: Jowhar SCA 2018: Jowhar et. al. , \"Effects of Human Sex Chromosome Dosage on Spatial Chromosome Organization\". Submitted to Molecular Biology of the Cell . Also at bioRxiv: 10.1101/346742 . Jowhar Methods 2017: Jowhar et. al. , \"HiCTMap: Detection and Analysis of Chromosome Territory Structure and Position by High-throughput Imaging\". Methods. 2018 Jun 1;142:30-38. doi: 10.1016/j.ymeth.2018.01.013. Epub 2018 Feb 10 . Also at bioRxiv 185942 . Gudla CSH 2017: Gudla et. al. , \"SpotLearn: Convolutional Neural Network for Detection of Fluorescence In Situ Hybridization (FISH) Signals in High-Throughput Imaging Approaches\". Cold Spring Harb Symp Quant Biol. 2017 Nov 28. pii: 033761. doi: 10.1101/sqb.2017.82.033761 . For further details please contact: Tom Misteli, Ph.D. mistelit@mail.nih.gov Director, Center for Cancer Research NIH Distinguished Investigator Head, Cell Biology of Genomes Group Laboratory of Receptor Biology and Gene Expression Center for Cancer Resea","default_branch":null,"files":null,"tree":[],"storefront":"/r/CBIIT","claimed":false,"request_supported":{"post":"https://gitbuyer.com/r/CBIIT/Misteli-Lab-CCR-NCI/request-supported","requests":0},"note":"indexed from public GitHub; nothing is for sale on this page. Clone it from GitHub. Paid listings live at /search."}